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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs61830926 chr10:910749 C/T 2.16E-5 406 15.18 16.38 10.57 KM Plot
LGG rs61830929 chr10:925966 A/G 2.55E-6 406 15.17 17.38 10.57 KM Plot
LGG rs61830931 chr10:932497 T/C 1.14E-5 402 15.2 16.38 12.17 KM Plot
LGG rs61830932 chr10:934183 T/C 4.13E-6 404 15.13 17.73 10.57 KM Plot
LGG rs61830933 chr10:934195 G/A 1.22E-5 401 15.2 15.73 12.17 KM Plot
LGG rs61830935 chr10:938623 G/A 0.000154 402 15.18 16.38 13.3 KM Plot
LGG rs61837909 chr1:247317633 C/G 0 406 15.32 15.37 3.2 KM Plot
LGG rs61837910 chr1:247323575 C/G 6.06E-6 405 15.32 14.93 12.25 KM Plot
LGG rs61837911 chr1:247329803 T/C 0 403 15.2 14.93 3.2 KM Plot
LGG rs61837912 chr1:247330928 T/C 0 401 15.18 14.83 3.2 KM Plot
LGG rs61851687 chr10:63307805 A/G 2.78E-5 406 16.12 10.82 17.88 KM Plot
LGG rs61851714 chr10:63324281 G/A 0.00019 402 16.12 11.17 17.07 KM Plot
LGG rs61851716 chr10:63326932 G/A 2.81E-5 402 16.28 10.93 17.07 KM Plot
LGG rs61851719 chr10:63338480 C/G 2.85E-5 401 16.28 11.05 17.07 KM Plot
LGG rs61851720 chr10:63341306 T/C 0.000192 401 16.12 11.3 17.07 KM Plot